I did check the .13 server for decommissioning as the program in the server is still running every day. Checked the logs of the SQL server agent that runs the JOBS and found out that the server does not encounter an error in uploading the Masterfile even thou we encounter the error in 11.17 server. I tried uploading again the Masterfile text file in the test database with ignoring errors to test if I will be able to upload the text file with a comma in the data. I did successfully upload the text file in the temp table and checked the SKU with a comma and didn't found out any comma in the select query.

Reconfigure the jobs in the SQL server agent and create a new package to point it to the Daily Masterfile update. I also reconfigure the task I created in the scheduled task for the end of the month inventory, sales, Masterfile and daily rep.

I will check the Masterfile on Monday to see if all I reconfigure in the server worked. If all things work out and we didn't hear any issue in IAS that generates the report. I think we don't need to change anything for JDA and IAS side.